Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015809698.1_cds_XP_016495887.1_10160
CDS Infomation

[gene=LOC107814899] [db_xref=GeneID:107814899] [protein=two-component response regulator ORR21-like isoform X2] [protein_id=XP_016495887.1] [location=complement(join(8921..10111,10511..10587,10680..11078,11150..11302,13165..13309))] [gbkey=CDS]
Sequence

ATGGCAAGTATGAGTGGCGATGGTGCCACTTGTAAGTCGGAAGCTACAGATACGTTTCCA
GTAGGGTTAAGAGTTCTTGTGGTTGATGACGACATCGTTTGCCTCAGAATTCTTGAGCAA
ATGCTTCGCAAATGCAAGTATTCAGTTACCACTTGTACCCAAGCTACGGTGGCATTAAAC
CTATTACGGGAACGGAGGGGGTCTTTTGATGTTGTACTGAGTGATGTTCATATGCCTGAT
ATGGATGGTTTTAAACTTCTTGAGCTTGTTGGGTTGGAAATGGACCTTCCAGTAATAATG
ATGTCAGGTGATGGAAGAACCAACCTCGTCATGAGAGGAGTTCAACATGGGGCTTGTGAT
TATTTGATTAAGCCTATACGTGACGAGGAGCTAAAGAATATCTGGCAGCATGTTGTTAGG
AAAAAATGTAGCTTCAGTAAAGAGCCTGAATATTCTGGCAGCTTGGATGATAATGATCGG
CATAAACGAGGAAATGATGATGCTGAATGTGCTTCTTCTGTAATTGAAGGAGCAGATAGA
GTGCTAAAACCACAGAAAAAGAAAAGAGATGCAAAAGAGGAAGATGAAATGGAAATGGAA
AATGATGACCCAACTACTGCAAAAAAGCCACGTGTAGTCTGGTCAGTGGAGCTTCATCAG
CAATTTGTTAGTGCCGTCAACCAACTTGGGATTGATAAGGCTGTACCTAAGAGAATCCTT
GAACTGATGAATGTTCCTGGTTTGACAAGAGAAAATGTGGCAAGCCATCTGCAGAAATTT
AGGCTGTATTTGAAGAGGCTAAGTGGAGTAGCTCAGCAACAGGGTGGCTTCCCCAGTACC
TACTGCGGGCCAATAGAACAGAATCCAAAACTTGGTTCACTAGGGAGATTTGACATTCAA
GCACTGGCAGCCTCTGGTCAAATTCCTCCTGAAACTTTGACAGCTCTTCATGCCGAGCTT
TTAGGTCGATCGTCAGGTAACCTGGTTTTACCATCAGTAGAGCAGCCGGATCTCCTACAA
GCATCCCTGCAGCAAGCAAAGTGCATACCTGTTGATCATGTTGTGGCCTATGGTCAGCCT
CTGATGAAATGCCCTCCCAGCATTACTAATCCTAAACTTCTTTCTCAACCTACGATGTCT
GCTGAGGATGTTCATTCAGGATTTGGATCCTGGCGAGCAAAAAATATATGTATGGTTCCT
AGCAGCAATCTCACTGGGCTAGCTGCTCCAGACAGCAACATGTTAATGGCAATGATGCAA
CATCAGCAACAATGGCAAAAGCAGCAGCAGCTGGAACAGCAACAGAAACAATCTGGTCTT
TCTGAGGCCAACCATTCAATTAATGTGAAACCTTCTTGCCTTGTATTGCCTTCTCAATCG
CCAGGTAATTTCCAAGTGGGAGATAGTCCTGGCTCCATTAGCCAGGCCTGCAGTTTGAGT
AAATCTTCAATAATTGATTATAGAGTTCTCTCGCCACAGTCTAATAATTCATCAGCTGTG
GTGCAAGTGTTAGACAGGGAACTCAAACCAGCATGTGGCTTAAACAGGCTCTCCACTGCA
GCTTCTTTCACTCCTTTAGTCTCAGCATGCTCTGTTCATGCTGACAATAGTGTTGGTCTG
CAGCTTCATAACTCTAGCTCGGCATTTGGTGCTTCTAAACAACTGCCAGGCTTTGTTCCT
AACCATCTGGGCTTTCCAGTTTCATGTTATAGTAAACCAAGTCAGATTCTTGACCAGGGA
CCTACGAGAAATCCTGGAGTTGGTAAAGCTGCCTCCATTCCCAGTCGTTTTGCTGTAGAC
GAGTCTGATTCGCCAATGTGCAATTTCAGTACTGCAAAAGTTTATACTGAGGACACTAAA
GTTAAGCAGGAGCCTAACATGAATATCATGGAAAATGCTAAAGTTGGACCAGCTCTTTTT
CAAAACTTTCCATCTGGTGATCTTATGAGTGTCTTCAGCGACTAG

Peptide Sequence

PEP ID

XP_016495887.1
PEP Infomation

PREDICTED: two-component response regulator ORR21-like isoform X2 [Nicotiana tabacum]
Sequence

MASMSGDGATCKSEATDTFPVGLRVLVVDDDIVCLRILEQMLRKCKYSVTTCTQATVALN
LLRERRGSFDVVLSDVHMPDMDGFKLLELVGLEMDLPVIMMSGDGRTNLVMRGVQHGACD
YLIKPIRDEELKNIWQHVVRKKCSFSKEPEYSGSLDDNDRHKRGNDDAECASSVIEGADR
VLKPQKKKRDAKEEDEMEMENDDPTTAKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRIL
ELMNVPGLTRENVASHLQKFRLYLKRLSGVAQQQGGFPSTYCGPIEQNPKLGSLGRFDIQ
ALAASGQIPPETLTALHAELLGRSSGNLVLPSVEQPDLLQASLQQAKCIPVDHVVAYGQP
LMKCPPSITNPKLLSQPTMSAEDVHSGFGSWRAKNICMVPSSNLTGLAAPDSNMLMAMMQ
HQQQWQKQQQLEQQQKQSGLSEANHSINVKPSCLVLPSQSPGNFQVGDSPGSISQACSLS
KSSIIDYRVLSPQSNNSSAVVQVLDRELKPACGLNRLSTAASFTPLVSACSVHADNSVGL
QLHNSSSAFGASKQLPGFVPNHLGFPVSCYSKPSQILDQGPTRNPGVGKAASIPSRFAVD
ESDSPMCNFSTAKVYTEDTKVKQEPNMNIMENAKVGPALFQNFPSGDLMSVFSD

Transcript Sequence

Gene sequence data has not been registered.